TABLE I Numerical summary of the proteins (peptides) detected by PRISM in mouse lung and liver tissue

The total number of high confidence peptides and corresponding proteins that pass the STATQUEST p value <0.02 filter cut-off are as follows: total peptides, 24,305; unique peptides, 8,606; unique proteins, 2,106. A summary of the protein distributions detected in the lung and liver fractions are shown. N, nucleus; C, cytosol; MS, soluble mitochondria; MP, insoluble mitochondria; MI, microsomes.

N C MS MP MI Total

Lung
 Total peptides 2,950 3,531 2,712 998 1,081 11,272
 Peptides 1,243 947 944 463 645 4,242
 Proteins 671 526 521 280 376 1,460
Liver
 Total peptides 2,374 2,831 3,219 2,031 2,578 13,033
 Peptides 865 745 1,053 681 1,020 4,364
 Proteins 535 410 472 351 476 1,358