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Originally published In Press as doi:10.1074/mcp.M300045-MCP200 on June 26, 2003.
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Molecular & Cellular Proteomics 2:463-473, 2003.
© 2003 by The American Society for Biochemistry and Molecular Biology, Inc.


Research

A High-throughput Quantitative Multiplex Kinase Assay for Monitoring Information Flow in Signaling Networks

Application to Sepsis-Apoptosis*

Kevin A. Janes{ddagger}, John G. Albeck§, Lili X. Peng{ddagger}, Peter K. Sorger{ddagger},§, Douglas A. Lauffenburger{ddagger},§ and Michael B. Yaffe{ddagger},§,||

From the {ddagger} Biological Engineering Division, § Department of Biology, and Center for Cancer Research, Massachusetts Institute of Technology, 400 Main Street, Cambridge, MA 02139

To treat complex human diseases effectively, a systems-level approach is needed to understand the interplay of environmental cues, intracellular signals, and cellular behaviors that underlie disease states. This approach requires high-throughput, multiplex techniques that measure quantitative temporal variations of multiple protein activities in the intracellular signaling network. Here, we describe a single microtiter-based format that simultaneously quantifies protein kinase activities in the phosphatidylinositol 3-kinase pathway (Akt), nuclear factor-{kappa}B pathway (IKK), and three core mitogen-activated protein kinase pathways (ERK, JNK1, MK2). These parallel high-throughput assays are stringently linear, redundantly specific, reproducible, and sensitive compared with classical low-throughput techniques. When applied to a model of sepsis-induced colon epithelial apoptosis, this approach identified a late phase of Akt activity as a critical mediator of cell survival that quantitatively contributed to the efficacy of insulin as an anti-apoptotic cue. Thus, sampling parallel nodes in the intracellular signaling network identified part of the molecular mechanism underlying the efficacy of insulin in the treatment of human sepsis.


|| To whom correspondence should be addressed: Center for Cancer Research, Massachusetts Institute of Technology, 77 Massachusetts Ave. E18-580, Cambridge, MA 02139. Tel.: 617-452-2103, Fax: 617-452-4978; E-mail: myaffe{at}mit.edu


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