Advertisement
MCP
HOME HELP FEEDBACK SUBSCRIPTIONS ARCHIVE SEARCH TABLE OF CONTENTS
 QUICK SEARCH:   [advanced]


     


Originally published In Press as doi:10.1074/mcp.R500009-MCP200 on February 5, 2005.
This Article
Right arrow Full Text
Right arrow Full Text (PDF)
Right arrow All Versions of this Article:
R500009-MCP200v1
R500009-MCP200v2
4/4/384    most recent
Right arrow Submit a response
Right arrow Alert me when this article is cited
Right arrow Alert me when eLetters are posted
Right arrow Alert me if a correction is posted
Right arrow Citation Map
Services
Right arrow Email this article to a friend
Right arrow Similar articles in this journal
Right arrow Similar articles in PubMed
Right arrow Alert me to new issues of the journal
Right arrow Download to citation manager
Right arrowRequest Permissions
Right arrow Glossary
Citing Articles
Right arrow Citing Articles via HighWire
Right arrow Citing Articles via Google Scholar
Google Scholar
Right arrow Articles by Uhlen, M.
Right arrow Articles by Ponten, F.
Right arrow Search for Related Content
PubMed
Right arrow PubMed Citation
Right arrow Articles by Uhlen, M.
Right arrow Articles by Ponten, F.
Social Bookmarking
 Add to CiteULike   Add to Complore   Add to Connotea   Add to Del.icio.us   Add to Digg   Add to Reddit   Add to Technorati  
What's this?

Molecular & Cellular Proteomics 4:384-393, 2005.
© 2005 by The American Society for Biochemistry and Molecular Biology, Inc.


Review

Antibody-based Proteomics for Human Tissue Profiling

Mathias Uhlen{ddagger},§ and Fredrik Ponten

From the {ddagger} Department of Biotechnology, AlbaNova University Center, Royal Institute of Technology, SE-10691 Stockholm, Sweden; and Department of Genetics and Pathology, Rudbeck Laboratory, SE-751 85 Uppsala University, Uppsala, Sweden

Here, we describe the use of antibody-based proteomics involving the generation of protein-specific antibodies to functionally explore the human proteome. The antibodies can be used for analysis of corresponding proteins in a wide range of assay platforms, including i) immunohistochemistry for detailed tissue profiling, ii) specific affinity reagents for various functional protein assays, and iii) capture ("pull-down") reagents for purification of specific proteins and their associated complexes for structural and biochemical analyses. In this review, the use of antibodies for such analysis will be discussed with focus on the possibility to create a descriptive and comprehensive protein atlas for tissue distribution and subcellular localization of human proteins in both normal and disease tissues.


§ To whom correspondence should be addressed: Department of Biotechnology, AlbaNova University Center, Royal Institute of Technology, 10691 Stockholm, Sweden. E-mail: mathias.uhlen{at}biotech.kth.sem


Add to CiteULike CiteULike   Add to Complore Complore   Add to Connotea Connotea   Add to Del.icio.us Del.icio.us   Add to Digg Digg   Add to Reddit Reddit   Add to Technorati Technorati    What's this?


This article has been cited by other articles:


Home page
Mol. Cell. ProteomicsHome page
E. Bjorling and M. Uhlen
Antibodypedia, a Portal for Sharing Antibody and Antigen Validation Data
Mol. Cell. Proteomics, October 1, 2008; 7(10): 2028 - 2037.
[Abstract] [Full Text] [PDF]


Home page
Mol. Cell. ProteomicsHome page
L. Berglund, E. Bjorling, P. Oksvold, L. Fagerberg, A. Asplund, C. Al-Khalili Szigyarto, A. Persson, J. Ottosson, H. Wernerus, P. Nilsson, et al.
A Genecentric Human Protein Atlas for Expression Profiles Based on Antibodies
Mol. Cell. Proteomics, October 1, 2008; 7(10): 2019 - 2027.
[Abstract] [Full Text] [PDF]


Home page
Mol. Cell. ProteomicsHome page
E. Bjorling, C. Lindskog, P. Oksvold, J. Linne, C. Kampf, S. Hober, M. Uhlen, and F. Ponten
A Web-based Tool for in Silico Biomarker Discovery Based on Tissue-specific Protein Profiles in Normal and Cancer Tissues
Mol. Cell. Proteomics, May 1, 2008; 7(5): 825 - 844.
[Abstract] [Full Text] [PDF]


Home page
BloodHome page
S. Ek, M. Dictor, M. Jerkeman, K. Jirstrom, and C. A. K. Borrebaeck
Nuclear expression of the non B-cell lineage Sox11 transcription factor identifies mantle cell lymphoma
Blood, January 15, 2008; 111(2): 800 - 805.
[Abstract] [Full Text] [PDF]


Home page
BioinformaticsHome page
N. Grabe, T. Pommerencke, T. Steinberg, H. Dickhaus, and P. Tomakidi
Reconstructing protein networks of epithelial differentiation from histological sections
Bioinformatics, December 1, 2007; 23(23): 3200 - 3208.
[Abstract] [Full Text] [PDF]


Home page
Nucleic Acids ResHome page
R. J. Marinelli, K. Montgomery, C. L. Liu, N. H. Shah, W. Prapong, M. Nitzberg, Z. K. Zachariah, G. J. Sherlock, Y. Natkunam, R. B. West, et al.
The stanford tissue microarray database
Nucleic Acids Res., November 7, 2007; (2007) gkm861v1.
[Abstract] [Full Text] [PDF]


Home page
Mol Cancer ResHome page
M. Ferletta, L. Uhrbom, T. Olofsson, F. Ponten, and B. Westermark
Sox10 Has a Broad Expression Pattern in Gliomas and Enhances Platelet-Derived Growth Factor-B Induced Gliomagenesis
Mol. Cancer Res., September 1, 2007; 5(9): 891 - 897.
[Abstract] [Full Text] [PDF]


Home page
Mol. Cell. ProteomicsHome page
M. Uhlen
Mapping the Human Proteome Using Antibodies
Mol. Cell. Proteomics, August 1, 2007; 6(8): 1455 - 1456.
[Full Text] [PDF]


Home page
J. Histochem. Cytochem.Home page
T. Guo, W. Wang, P. A. Rudnick, T. Song, J. Li, Z. Zhuang, R. J. Weil, D. L. DeVoe, C. S. Lee, and B. M. Balgley
Proteome Analysis of Microdissected Formalin-fixed and Paraffin-embedded Tissue Specimens
J. Histochem. Cytochem., July 1, 2007; 55(7): 763 - 772.
[Abstract] [Full Text] [PDF]


Home page
J. Histochem. Cytochem.Home page
A.-C. Andersson, S. Stromberg, H. Backvall, C. Kampf, M. Uhlen, K. Wester, and F. Ponten
Analysis of Protein Expression in Cell Microarrays: A Tool for Antibody-based Proteomics
J. Histochem. Cytochem., December 1, 2006; 54(12): 1413 - 1423.
[Abstract] [Full Text] [PDF]


Home page
Mol. Cell. ProteomicsHome page
B. B. Haab, A. G. Paulovich, N. L. Anderson, A. M. Clark, G. J. Downing, H. Hermjakob, J. LaBaer, and M. Uhlen
A Reagent Resource to Identify Proteins and Peptides of Interest for the Cancer Community: A WORKSHOP REPORT
Mol. Cell. Proteomics, October 1, 2006; 5(10): 1996 - 2007.
[Abstract] [Full Text] [PDF]


Home page
Mol. Cell. ProteomicsHome page
M. Uhlen, E. Bjorling, C. Agaton, C. A.-K. Szigyarto, B. Amini, E. Andersen, A.-C. Andersson, P. Angelidou, A. Asplund, C. Asplund, et al.
A Human Protein Atlas for Normal and Cancer Tissues Based on Antibody Proteomics
Mol. Cell. Proteomics, December 1, 2005; 4(12): 1920 - 1932.
[Abstract] [Full Text] [PDF]


Home page
Hum Mol GenetHome page
A. Rada-Iglesias, O. Wallerman, C. Koch, A. Ameur, S. Enroth, G. Clelland, K. Wester, S. Wilcox, O. M. Dovey, P. D. Ellis, et al.
Binding sites for metabolic disease related transcription factors inferred at base pair resolution by chromatin immunoprecipitation and genomic microarrays
Hum. Mol. Genet., November 15, 2005; 14(22): 3435 - 3447.
[Abstract] [Full Text] [PDF]


Home page
Mol. Cell. ProteomicsHome page
A. I. Nesvizhskii and R. Aebersold
Interpretation of Shotgun Proteomic Data: The Protein Inference Problem
Mol. Cell. Proteomics, October 1, 2005; 4(10): 1419 - 1440.
[Abstract] [Full Text] [PDF]


Home page
Mol. Cell. ProteomicsHome page
E. Boeri Erba, E. Bergatto, S. Cabodi, L. Silengo, G. Tarone, P. Defilippi, and O. N. Jensen
Systematic Analysis of the Epidermal Growth Factor Receptor by Mass Spectrometry Reveals Stimulation-dependent Multisite Phosphorylation
Mol. Cell. Proteomics, August 1, 2005; 4(8): 1107 - 1121.
[Abstract] [Full Text] [PDF]




HOME HELP FEEDBACK SUBSCRIPTIONS ARCHIVE SEARCH TABLE OF CONTENTS
 All ASBMB Journals   Journal of Biological Chemistry 
 Journal of Lipid Research   ASBMB Today 
Copyright © 2005 by the American Society for Biochemistry and Molecular Biology.
Advertisement
spacer
Advertisement
Advertisement