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Molecular & Cellular Proteomics 5:801-810, 2006.
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| ABSTRACT |
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Numerous genetic and proteomic studies of cilia have elucidated the primary structure of axonemal proteins, leading to a better understanding of their function (3, 4); however, less attention has been paid to the accessory structures unique to sperm flagella. Each structure is composed of a heterogeneous array of polypeptides, but relatively few of these have been identified and characterized (59). The ODF, FS, and mitochondrial sheath proteins that have been identified are conserved among various mammalian species, suggesting they perform critical functions. Although the identification of specific proteins has not been particularly informative as to the function(s) of the ODFs, the characterization of FS proteins has been more revealing. In addition to being a structural entity that provides a support for the flagellum, FS proteins are involved in cellular signaling and metabolism (5, 10).
Recognizing that only a few flagellar accessory structure proteins have been characterized at the molecular level, we hypothesized that the identification of additional ODF, FS, and mitochondrial sheath components would provide a better understanding of their function. Taking advantage of the SDS-insoluble nature of the accessory structures to isolate them free of axonemal and plasma membrane components, we utilized two-dimensional gel electrophoresis and mass spectrometry to identify >50 proteins present in these structures. These findings support a role for these structures in cell signaling, glycolysis, and metabolism during sperm function.
| EXPERIMENTAL PROCEDURES |
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Gel Electrophoresis
Two-dimensional gel electrophoresis was performed with the Ettan IPGphor II and Ettan DALTsix equipment and PlusOneTM reagents from Amersham Biosciences. Samples (
100900 µg of protein in 200 µl of sample buffer) were mixed with 250 µl of rehydration buffer (8 M urea, 2% (w/v) CHAPS, 1% IPG buffer (pH 311, non-linear), 2 mg/ml DTT) and loaded in the IPGphor strip holder. Immobiline Drystrips (pH 311 non-linear, 24 cm) were placed in the holder and overlaid with
4 ml of DryStrip cover fluid. Strips were hydrated under 50 V for 24 h and focused afterward on the IPGphor IEF system for a total of 80 kV-h at 20 °C.
After electrophoresis, each strip was equilibrated with 15 ml of equilibration buffer A (6 M urea, 100 mM Tris-HCl, pH 8.8, 30% (v/v) glycerol, 2% (w/v) SDS, 1% DTT) by rocking for 15 min and then with 15 ml of equilibration buffer B (6 M urea, 100 mM Tris-HCl, pH 8.8, 30% (v/v) glycerol, 2% (w/v) SDS, 2.5% iodoacetamide) for an additional 15 min. For the second dimension, the strips then were placed on top of 10% polyacrylamide gels containing SDS using the Ettan DALTsix apparatus. After electrophoresis, proteins were either stained with silver or with colloidal Coomassie Blue (for subsequent protein identification). The sizes of the proteins were estimated by comparing their positions with their theoretical molecular weights.
Mass Spectrometry and Microsequencing
Equipment and software were available in the Proteomics Core Facility at the University of Pennsylvania. Two-dimensional gels were scanned with a Typhoon 9400 scanner (Amersham Biosciences), and the spots were analyzed with Decyder software (Amersham Biosciences) and picked either manually or robotically. After digestion with trypsin, proteins were identified by MALDI-TOF/TOF mass spectrometry using a Voyager 4700 Proteomics Analyzer mass spectrometer (Applied Biosystems, Foster City, CA). MALDI plates were calibrated using six calibration spots as recommended by the manufacturer, resulting in a mass accuracy of approximately ±50 ppm. Peptide mass maps were acquired in reflectron mode (20-keV accelerating voltage) with 155-ns delayed extraction, averaging 2000 laser shots per spectrum. Trypsin autolytic peptides (m/z 842.51, 1045.56, and 2211.10) were used to internally calibrate each spectrum to a mass accuracy within 20 ppm. The MS/MS spectra were centroided and deisotoped using the AB 4700 controlling software based on a specified signal/noise ratio and the intensities of the fragment ions and then automatically stored by the AB 4700 controlling software. Additional filtering provided by the standard software package was in terms of the number of peaks per m/z region, which was set to the 20 most intense peaks per 200 Da. The mass range for fragment ions was always from 70 Da to the precursor mass minus 50 Da.
The spectra were analyzed using GPS Explorer (Version 3.0, Applied Biosystems), which acts as an interface between the Oracle database containing raw spectra and a local copy of the Mascot search engine (Version 1.9.05). Peptide peaks with a signal/noise ratio greater than 5 and a mass between m/z 900 and 4000 were searched against the National Center for Biotechnology Information (NCBI) Mouse Reference Sequence (RefSeq) database, release 5 (release date, May 02, 2004; number of accessions included, 1,255,613). The 10 most intense peaks were automatically selected for MS/MS. Up to one missed trypsin cut was allowed, and the data were searched using oxidation of methionine and carbamidomethylation of cysteine as variable modifications.
For microsequencing, peptide samples were dissolved in 5 µl of 0.1% formic acid, injected into a C18 capillary column, and eluted by linearly increasing the mobile phase composition to 98% B (0.1% formic acid in 100% acetonitrile) at a flow rate of 200 nl/min. The eluted peptides were sequenced on line with a nanospray/Qstar-XL mass spectrometer (Applied Biosystems). The data were acquired and analyzed with Analyst QS. The protein identification and database search were performed with Mascot dll script of Analyst QS; the combined MS and MS/MS data were used for the Mascot database search. A protein score of >70 with a protein confidence of identification of >95% was considered acceptable.
Indirect Immunofluorescence Analyses
Epididymal sperm were collected, attached to slides, and fixed with 4% paraformaldehyde for 15 min. After washing with PBS, the sperm were permeabilized with 20 °C methanol for 2 min. The slides were washed with PBS, and the samples were incubated with 10% goat serum in PBS (blocking solution) for 30 min at room temperature and then with a rabbit anti-tektin antibody (generous gift of Dr. Christian Höög, 1:25 dilution) (14) in blocking solution for 1 h at room temperature. For a control, PBS-goat serum was substituted for the primary antibody. After washing with PBS, the samples were incubated with a secondary antibody linked with Fluo-488 (Molecular Probes, Eugene, OR) diluted 1:500 in blocking solution for 1 h at room temperature. After washing with PBS, the samples were mounted with coverslips using Fluoromount-G, examined using a Nikon Eclipse TE 300 microscope (Nikon Corp., Tokyo, Japan), and photographed with the MetaMorph® imaging system (Universal Imaging Corp., Downingtown, PA).
Immunoblot Analyses
Proteins from epididymal sperm and tail preparations were separated by SDS-PAGE on a 10% polyacrylamide gel and transferred to PVDF membranes (Millipore Corp., Bedford, MA). The membranes were blocked with TBST (25 mM Tris-HCl, pH 8.0, 125 mM NaCl, 0.1% Tween 20) containing 5% nonfat dry milk and incubated with either a mouse anti-bovine
-tubulin antibody (1:100 dilution) (Molecular Probes) or the rabbit anti-tektin antibody (1:100 dilution). After washing with TBST, the blots were incubated with either a goat anti-mouse IgG (to visualize tubulins) or a goat anti-rabbit IgG (to visualize tektins); both antibodies were conjugated to horseradish peroxidase (Amersham Biosciences) and were used at a 1:5000 dilution. The bound enzyme was detected with the ECL kit (Amersham Biosciences) according to the manufacturers directions and exposed to film.
| RESULTS |
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200 µg) showed that, after silver staining, a highly reproducible pattern of protein spots was visualized (Fig. 1A). When SDS-insoluble tail proteins (
200 µg) were analyzed, the pattern in multiple gels also was very reproducible (Fig. 1B). As expected, the patterns between the two protein samples were not identical. By comparison with whole sperm samples, we identified proteins that were absent in the tail preparations; these proteins represent components of the sperm head, axoneme, cytoplasm, or plasma membrane. Because high molecular weight proteins are difficult to detect by 2D gel electrophoresis, we were concerned that we would not be able to identify such polypeptides in the tail (16). However, after silver staining tail proteins separated by 1D SDS-PAGE, only one prominent band with Mr >90,000 was observed, suggesting that we did not miss a large number of higher molecular weight proteins in our analysis.2
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30,00040,000 range was observed in the basic area (pH 79) of the gel (Fig. 2A, see proteins denoted 130, 131, and 132); the similar region in the silver-stained gel was less intense. The difference between the patterns of the two gels could be due to the stains used. The linear dynamic range of colloidal Coomassie Blue is 30250 ng, whereas silver stain is not quantitative when amounts >60 ng are present (17). In addition, silver stain shows more protein-to-protein variability, suggesting that some proteins may not be detected or may not appear to be as abundant as proteins stained with Coomassie. Variability in the detection of low abundance proteins by the two stains also may contribute to the differences in protein patterns. There also were two areas of the gel that did not resolve well presumably due to overloading, one at Mr
80,000, pH 5.56.0 and one at Mr
30,000, pH 7.09.0. To identify proteins in these regions, we decreased the amount of protein loaded to 100 µg (Fig. 2B).
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This analysis identified
50 individual proteins that could be separated into five general categories: 1) proteins previously reported to localize to these structures, 2) proteins that had not been shown to localize to any accessory structures but would be predicted to be present, 3) proteins known to be part of the flagellum but not localized to a specific site, 4) proteins not expected to be part of the accessory structures based on their previously reported locations, and 5) unknown proteins for which information is not available to make a determination as to location or function (Table I). We did not find proteins associated with components of the sperm head, e.g. nucleus, perinuclear theca, and acrosome. Even though the tubulins are the most abundant proteins of the axoneme, neither
- nor ß-tubulin was identified in the proteomic analysis. Furthermore
-tubulin was not detected by immunoblot analysis of SDS-insoluble tail proteins (Fig. 3).
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45,00055,000). This immunoreactivity was even more predominant when SDS-insoluble tail proteins were analyzed. In addition, immunofluorescence of whole sperm detected tektins in the principal piece; however, SDS-insoluble tail preparations showed that tektins were present along the entire length of the flagellum (Fig. 5), suggesting that the tektins in the midpiece of intact sperm may not be accessible to the antibody.
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| DISCUSSION |
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50 individual proteins. These were placed into five different categories (Table I) and are discussed below.
Proteins Previously Reported to Localize to the Accessory Structures
The proteomic approach is validated by our identification of proteins that were shown previously to be in flagellar accessory structures. The protein kinase A anchor protein (AKAP), AKAP3, and the sperm-specific isoform of glyceraldehyde-3-phosphate dehydrogenase, GAPD-S, are present in the FS (8, 18, 19). We also identified ODF1 and ODF2, which are part of the outer dense fibers (7, 20). Glutathione peroxidase is found in mitochondria of the flagellar midpiece (21).
Of note from this analysis, many of the protein spots were identified as either ODF1 or ODF2. The identification of multiple forms of ODF proteins is not a new observation. For example, one-dimensional immunoblot analysis of ODF2 shows a very diverse pattern of polypeptides of Mr
20,00090,000 (7). There are several potential explanations for these observations. The multiple ODF1 or ODF2 spots could represent isoforms or post-translationally modified (e.g. phosphorylated or proteolytically processed) versions of either protein. Alternatively these proteins might be particularly susceptible to degradation even though protease inhibitors were included in all steps of protein preparation and gel electrophoresis.
Proteins That Had Not Been Shown to Localize to Any Accessory Structure but Would be Predicted to be Present
Glycolytic enzymes, e.g. GAPD-S and the sperm-specific isoforms of hexokinase, HK1-sc, are localized to the FS where they are involved in ATP production. In this regard, the genetic ablation of GAPD-S results in the production of immotile sperm, implicating glycolysis as a critical source of energy for motility and suggesting that other glycolytic enzymes are tethered to the FS (10). We report in this study that aldolase 1, triose-phosphate isomerase, and phosphoglycerate kinase 2 were present in the SDS-insoluble tail preparation. As shown in Fig. 6, these findings indicate that the enzymes responsible for four consecutive steps in the glycolytic pathway (from the conversion of fructose 1,6-diphosphate to 3-phosphoglycerate) are localized to the accessory structures of the sperm flagellum. Because both HK1-sc and GAPD-S are part of the FS, we anticipate that aldolase, triose-phosphate isomerase, and phosphoglycerate kinase 2 also will be found tethered to this structure. Many of the remaining glycolytic enzymes are quite large (Mr >100,000), suggesting that they would not be detected by this type of 2D electrophoretic analysis. Nevertheless we predict that these enzymes will be localized to the principal piece and, perhaps, restricted to the FS. The assembly of the glycolytic components in the FS would create a "metabolosome" that could organize and coordinate the production of ATP in the sperm flagellum.
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Proteins Known to Be Part of the Flagellum but Not Expected to Be Part of the Accessory Structures
The tektins are constitutive proteins of microtubules in cilia, flagella, basal bodies, and centrioles and are thought to play a role in the stability of axonemal microtubules. They comprise one of the protofilaments in the wall of the A tubule and have different extraction properties compared with doublet microtubules (24). We discovered and confirmed by immunoblot and immunofluorescence analysis that five members of the tektin family, tektins 13 and the newly identified tektins 4 and 5, are part of the tail structures that are insoluble in SDS.
Additional Proteins Found in the Flagellar Accessory Structures
Two additional classes of proteins were identified in the SDS-insoluble tail fraction. One class consists of previously uncharacterized proteins. The second class includes proteins that have already been described, but their discovery in sperm flagellar structures was unexpected. For example, the meiosis-specific nuclear structural protein 1 is a skeletal protein that has been proposed to be nuclear and/or perinuclear during meiotic prophase (25). Another protein, speriolin (RIKEN cDNA 1700084J23), recently was identified and characterized by its ability to interact with Cdc20 (26). Speriolin associates with centrosomes during meiosis and then is found in the cytoplasm of condensing spermatids; although present in sperm, its location was not reported. As we found for sperm, both meiosis-specific nuclear structural protein 1 and speriolin are detergent-resistant proteins in spermatids. The presence of these proteins in flagellar structures suggests that they may have additional functions in sperm.
Known Flagellar Accessory Proteins Not Found in This Analysis
Although the identification of a number of proteins known to be part of the accessory structures of the sperm flagellum verified this proteomic approach, some proteins that we predicted to be found were not. Many of these polypeptides, e.g. glycolytic enzymes, have molecular weights >100,000, a size that does not resolve well by 2D gel electrophoresis. For example, HK1-sc (Mr
116,000) was not found even though it is present in both the midpiece and principal piece (6, 27). Furthermore HK1-sc is not tightly tethered to the FS, suggesting that it was extracted during the preparation of the tail structures (28).
We also expected that AKAP4 (Mr
82,000), the major protein of the FS, would have been more readily detected. However, our procedure was to isolate discrete spots following 2D gel electrophoresis. Mouse AKAP4, on the other hand, tends to migrate as a broad smear under these conditions.2 This may be an inherent solubility property of AKAP4 and reflect the phosphorylation status of the protein (29).
Implications
We identified
50 proteins as being part of the SDS-insoluble flagellar structures. Previous investigators considered the FS and ODFs as structures that modulate flagellar bending in motile sperm (1, 30). However, with the identification of polypeptides that comprise these structures, it is becoming clear that they are also dynamic entities, having roles in signaling, metabolism, and oxidative stress (5, 10, 31). We initially identified AKAP4, the major FS component, as a scaffolding protein by its ability to bind the regulatory subunit of the cAMP-dependent protein kinase A (PKA) (5). Because sperm motility is regulated by a series of protein phosphorylation/dephosphorylation events, the tethering of PKA to a specific subdomain of the flagellum suggests that AKAP4 is involved in the cAMP regulation of motility. The subsequent identification of other AKAPs in the FS and mitochondrial sheath indicates that the scaffolding of proteins may be a common mechanism in the highly compartmentalized spermatozoon (18, 3234). In addition, proteins other than PKA have been shown to bind these sperm AKAPs (35, 36). These findings have caused a reassessment of our previous concepts of multicomponent signal transduction systems. The assembly of signaling molecules into macromolecular complexes, i.e."transducisomes" or "signalosomes" may provide specificity, sensitivity, and speed in intracellular signaling pathways.
Many of the proteins from the SDS-insoluble tail structures are involved in the generation and utilization of ATP. Glycolysis occurs in the FS to generate ATP utilized both by PKA to regulate motility as well as by the dynein ATPases, which function as the flagellar motors. We identified the voltage-dependent anion channel 2 as part of our proteomic analysis, a finding consistent with its known presence in ODFs (37). The ability of the voltage-dependent anion channel 2 protein to bind and transport ATP has led to the hypothesis that their presence in the ODFs is important for the trafficking of ATP along the flagellum (37). Another mechanism to ensure availability of ATP is the reaction catalyzed by adenylate kinase that can generate one molecule each of ATP and AMP from two molecules of ADP. Mammalian sperm do not have the components of a phosphocreatine shuttle system as found in the sea urchin that allows the transport of high energy phosphate from the mitochondria to the axoneme (38). Instead of diffusion of ATP from mitochondria, energy for sperm motility is generated in the FS by glycolysis (10). AK can produce either ADP or stoichiometric amounts of ATP and AMP depending on the concentrations of the three nucleotides. In locations where ATP is utilized rapidly, e.g. the sperm flagellum, the direction favors the production of one molecule each of ATP and AMP from two molecules of ADP.
AK activity and tektins have been reported in cilia and flagella from a number of organisms (22, 23, 39, 40). Our proteomic analysis identified AK and tektins in the detergent-insoluble structures, which lack the axoneme. In Chlamydomonas, whose flagella do not contain the accessory structures typical of mammalian sperm, AK is found in association with the outer dynein arm-docking complex (41). This assembly is part of the A tubule of the outer microtubular doublets of the axoneme. Similarly the tektins also are localized to the walls of the A tubule; specifically they are near the binding site for the radial spokes, inner dynein arms, and nexin links (24). The genetic ablation of tektin-t (tektin 2) results in immotile sperm that show defects in dynein inner arm structure, suggesting that this tektin participates in inner arm formation and attachment (42). Tektin 4 also has been reported in flagella of rat sperm (43). Based on the identification of both AKs and tektins as part of the SDS-insoluble tail, we would predict that these proteins form a tight association with the ODFs as part of the 9 + 9 + 2 axonemal ODF organization. We are currently examining whether these proteins are involved in linking the axoneme to the accessory structures.
This study, along with previous investigations, demonstrates that the flagellar accessory structures are more than passive cytoskeletal elements. The presence of metabolic and signaling proteins indicates that the FS, mitochondrial sheath, and ODFs have active roles in sperm physiology. A knowledge of the assembly and activities of these structures may open up new avenues for understanding the basis for male reproduction.
| ACKNOWLEDGMENTS |
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| FOOTNOTES |
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Published, MCP Papers in Press, January 31, 2006, DOI 10.1074/mcp.M500322-MCP200
The costs of publication of this article were defrayed in part by the payment of page charges. This article must therefore be hereby marked "advertisement" in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.
1 The abbreviations used are: ODF, outer dense fiber; FS, fibrous sheath; 1D, one-dimensional; 2D, two-dimensional; AK, adenylate kinase; AKAP, A-kinase anchor protein; PKA, cAMP-dependent protein kinase A; GAPD-S, sperm-specific isoform of glyceraldehyde-3-phosphate dehydrogenase. ![]()
2 W. Cao, G. L. Gerton, and S. B. Moss, unpublished observations. ![]()
3 L. J. Maltais, The Jackson Laboratory, Bar Harbor, ME, personal communication. ![]()
* This work was supported by National Institutes of Health Grant HD06427. ![]()
S The on-line version of this article (available at http://www.mcponline.org) contains supplemental material. ![]()
To whom correspondence should be addressed: Center for Research on Reproduction and Womens Health, 1312 BRB II, 421 Curie Blvd., University of Pennsylvania Medical School, Philadelphia, PA 19104. Tel.: 215-573-4782; Fax: 215-573-7627; E-mail: smoss{at}mail.med.upenn.edu
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