Research:

Warm Ischemia-induced Alterations in Oxidative and Inflammatory Proteins in Hepatic Kupffer Cells in Rats

Jan Hirsch, Kirk C. Hansen, SooJinNa Choi, Joonhwa Noh, Ryutaro Hirose, John P. Roberts, Michael A. Matthay, Alma L. Burlingame, Jacquelyn J. Maher, and Claus U. Niemann
Mol Cell Proteomics 2006 5: 979-986. First Published on February 24, 2006; doi:10.1074/mcp.M500320-MCP200 [Abstract] [Full Text] [PDF]  

Proteome Analysis of Halobacterium sp. NRC-1 Facilitated by the Biomodule Analysis Tool BMSorter

Rueichi R. Gan, Eugene C. Yi, Yulun Chiu, Hookeun Lee, Yu-chieh P. Kao, Timothy H. Wu, Ruedi Aebersold, David R. Goodlett, and Wailap Victor Ng
Mol Cell Proteomics 2006 5: 987-997. First Published on February 23, 2006; doi:10.1074/mcp.M500367-MCP200 [Abstract] [Full Text] [PDF] Supplemental Data  

SwePep, a Database Designed for Endogenous Peptides and Mass Spectrometry

Maria Fälth, Karl Sköld, Mathias Norrman, Marcus Svensson, David Fenyö, and Per E. Andren
Mol Cell Proteomics 2006 5: 998-1005. First Published on February 26, 2006; doi:10.1074/mcp.M500401-MCP200 [Abstract] [Full Text] [PDF]  

Identification of Cellular Factors Associated with the 3'-Nontranslated Region of the Hepatitis C Virus Genome

Dylan Harris, Zhengbin Zhang, Binay Chaubey, and Virendra N. Pandey
Mol Cell Proteomics 2006 5: 1006-1018. First Published on February 24, 2006; doi:10.1074/mcp.M500429-MCP200 [Abstract] [Full Text] [PDF]  

Studying the Protein Organization of the Postsynaptic Density by a Novel Solid Phase- and Chemical Cross-linking-based Technology

Szu-Heng Liu, Huei-Hsuan Cheng, San-Yuan Huang, Pei-Chun Yiu, and Yen-Chung Chang
Mol Cell Proteomics 2006 5: 1019-1032. First Published on February 26, 2006; doi:10.1074/mcp.M500299-MCP200 [Abstract] [Full Text] [PDF]  

The Dynamic Alterations of H2AX Complex during DNA Repair Detected by a Proteomic Approach Reveal the Critical Roles of Ca²⁺/Calmodulin in the Ionizing Radiation-induced Cell Cycle Arrest

Yu-Chun Du, Sheng Gu, Jianhong Zhou, Tianyi Wang, Hong Cai, Mark A. MacInnes, E. Morton Bradbury, and Xian Chen
Mol Cell Proteomics 2006 5: 1033-1044. First Published on March 7, 2006; doi:10.1074/mcp.M500327-MCP200 [Abstract] [Full Text] [PDF] Supplemental Data  

Interdomain Conformational Changes in Akt Activation Revealed by Chemical Cross-linking and Tandem Mass Spectrometry

Bill X. Huang and Hee-Yong Kim
Mol Cell Proteomics 2006 5: 1045-1053. First Published on March 9, 2006; doi:10.1074/mcp.M600026-MCP200 [Abstract] [Full Text] [PDF]  

Molecular Dynamics of the Shewanella oneidensis Response to Chromate Stress

Steven D. Brown, Melissa R. Thompson, Nathan C. VerBerkmoes, Karuna Chourey, Manesh Shah, Jizhong Zhou, Robert L. Hettich, and Dorothea K. Thompson
Mol Cell Proteomics 2006 5: 1054-1071. First Published on March 8, 2006; doi:10.1074/mcp.M500394-MCP200 [Abstract] [Full Text] [PDF] Supplemental Data  

From Gene Expression Analysis to Tissue Microarrays: A Rational Approach to Identify Therapeutic and Diagnostic Targets in Lymphoid Malignancies

Sara Ek, Ulrika Andréasson, Sophia Hober, Caroline Kampf, Fredrik Pontén, Mathias Uhlén, Hartmut Merz, and Carl A. K. Borrebaeck
Mol Cell Proteomics 2006 5: 1072-1081. First Published on March 8, 2006; doi:10.1074/mcp.M600077-MCP200 [Abstract] [Full Text] [PDF]  

Characterization of the Drosophila Lipid Droplet Subproteome

Mathias Beller, Dietmar Riedel, Lothar Jänsch, Guido Dieterich, Jürgen Wehland, Herbert Jäckle, and Ronald P. Kühnlein
Mol Cell Proteomics 2006 5: 1082-1094. First Published on March 16, 2006; doi:10.1074/mcp.M600011-MCP200 [Abstract] [Full Text] [PDF] Supplemental Data  

Label-free Semiquantitative Peptide Feature Profiling of Human Breast Cancer and Breast Disease Sera via Two-dimensional Liquid Chromatography-Mass Spectrometry

Qinhua Cindy Ru, Luwang Andy Zhu, Jordan Silberman, and Craig D. Shriver
Mol Cell Proteomics 2006 5: 1095-1104. First Published on March 17, 2006; doi:10.1074/mcp.M500387-MCP200 [Abstract] [Full Text] [PDF] Supplemental Data  

A Proteome Reference Map and Proteomic Analysis of Bifidobacterium longum NCC2705

Jing Yuan, Li Zhu, Xiankai Liu, Ting Li, Ying Zhang, Tianyi Ying, Bin Wang, Junjun Wang, Hua Dong, Erling Feng, Qiang Li, Jie Wang, Hongxia Wang, Kaihua Wei, Xuemin Zhang, Cuifeng Huang, Peitang Huang, Liuyu Huang, Ming Zeng, and Hengliang Wang
Mol Cell Proteomics 2006 5: 1105-1118. First Published on March 20, 2006; doi:10.1074/mcp.M500410-MCP200 [Abstract] [Full Text] [PDF] Supplemental Data  

Proteomic Analysis of Colorectal Cancer Reveals Alterations in Metabolic Pathways: Mechanism of Tumorigenesis

Xuezhi Bi, Qingsong Lin, Tet Wei Foo, Shashikant Joshi, Tao You, Han-Ming Shen, Choon Nam Ong, Peh Yean Cheah, Kong Weng Eu, and Choy-Leong Hew
Mol Cell Proteomics 2006 5: 1119-1130. First Published on March 21, 2006; doi:10.1074/mcp.M500432-MCP200 [Abstract] [Full Text] [PDF]  

Systematic Characterization of Nuclear Proteome during Apoptosis: A Quantitative Proteomic Study by Differential Extraction and Stable Isotope Labeling

Sun-Il Hwang, Deborah H. Lundgren, Viveka Mayya, Karim Rezaul, Ann E. Cowan, Jimmy K. Eng, and David K. Han
Mol Cell Proteomics 2006 5: 1131-1145. First Published on March 14, 2006; doi:10.1074/mcp.M500162-MCP200 [Abstract] [Full Text] [PDF] Supplemental Data  

Technology:

Absolute Quantification of Multisite Phosphorylation by Selective Reaction Monitoring Mass Spectrometry: Determination of Inhibitory Phosphorylation Status of Cyclin-Dependent Kinases

Viveka Mayya, Karim Rezual, Linfeng Wu, Michael B. Fong, and David K. Han
Mol Cell Proteomics 2006 5: 1146-1157. First Published on March 16, 2006; doi:10.1074/mcp.T500029-MCP200 [Abstract] [Full Text] [PDF] Supplemental Data  

Dataset:

Relative and Absolute Quantification of Postsynaptic Density Proteome Isolated from Rat Forebrain and Cerebellum

Dongmei Cheng, Casper C. Hoogenraad, John Rush, Elizabeth Ramm, Max A. Schlager, Duc M. Duong, Ping Xu, Sameera R. Wijayawardana, John Hanfelt, Terunaga Nakagawa, Morgan Sheng, and Junmin Peng
Mol Cell Proteomics 2006 5: 1158-1170. First Published on February 28, 2006; doi:10.1074/mcp.D500009-MCP200 [Abstract] [Full Text] [PDF] Supplemental Data  

Information:

Additions & Corrections

Mol Cell Proteomics 2006 5: 1171. [Full Text] [PDF]  

Calendar

Mol Cell Proteomics 2006 5: 1172-1173. [Full Text] [PDF]  

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