Research:

A Web-based Tool for in Silico Biomarker Discovery Based on Tissue-specific Protein Profiles in Normal and Cancer Tissues

Erik Björling, Cecilia Lindskog, Per Oksvold, Jerker Linné, Caroline Kampf, Sophia Hober, Mathias Uhlén, and Fredrik Pontén
Mol Cell Proteomics 2008 7: 825-844. First Published on October 3, 2007; doi:10.1074/mcp.M700411-MCP200 [Abstract] [Full Text] [PDF] Supplemental Data  

Quantitative Proteomics Reveals Regulation of Dynamic Components within TATA-binding Protein (TBP) Transcription Complexes

Florence Mousson, Annemieke Kolkman, W. W. M. Pim Pijnappel, H. Th. Marc Timmers, and Albert J. R. Heck
Mol Cell Proteomics 2008 7: 845-852. First Published on December 17, 2007; doi:10.1074/mcp.M700306-MCP200 [Abstract] [Full Text] [PDF] Supplemental Data  

Eight-channel iTRAQ Enables Comparison of the Activity of Six Leukemogenic Tyrosine Kinases

Andrew Pierce, Richard D. Unwin, Caroline A. Evans, Stephen Griffiths, Louise Carney, Liqun Zhang, Ewa Jaworska, Chia-Fang Lee, David Blinco, Michal J. Okoniewski, Crispin J. Miller, Danny A. Bitton, Elaine Spooncer, and Anthony D. Whetton
Mol Cell Proteomics 2008 7: 853-863. First Published on October 21, 2007; doi:10.1074/mcp.M700251-MCP200 [Abstract] [Full Text] [PDF] Supplemental Data  

Targets of Tyrosine Nitration in Diabetic Rat Retina

Xianquan Zhan, Yunpeng Du, John S. Crabb, Xiaorong Gu, Timothy S. Kern, and John W. Crabb
Mol Cell Proteomics 2008 7: 864-874. First Published on December 28, 2007; doi:10.1074/mcp.M700417-MCP200 [Abstract] [Full Text] [PDF] Supplemental Data  

Overproduction or Absence of the Periplasmic Protease DegP Severely Compromises Bacterial Growth in the Absence of the Dithiol: Disulfide Oxidoreductase DsbA

Özlem Önder, Serdar Turkarslan, David Sun, and Fevzi Daldal
Mol Cell Proteomics 2008 7: 875-890. First Published on January 2, 2008; doi:10.1074/mcp.M700433-MCP200 [Abstract] [Full Text] [PDF] Supplementl Data  

Proteomics and Glycomics Analyses of N-Glycosylated Structures Involved in Toxoplasma gondii-Host Cell Interactions

Sylvain Fauquenoy, Willy Morelle, Agnès Hovasse, Audrey Bednarczyk, Christian Slomianny, Christine Schaeffer, Alain Van Dorsselaer, and Stanislas Tomavo
Mol Cell Proteomics 2008 7: 891-910. First Published on January 9, 2008; doi:10.1074/mcp.M700391-MCP200 [Abstract] [Full Text] [PDF] Supplemental Data  

Trafficking and Postsecretory Events Responsible for the Formation of Secreted Human Salivary Peptides: A Proteomics Approach

Irene Messana, Tiziana Cabras, Elisabetta Pisano, Maria Teresa Sanna, Alessandra Olianas, Barbara Manconi, Mariagiuseppina Pellegrini, Gaetano Paludetti, Emanuele Scarano, Antonella Fiorita, Stefania Agostino, Alessia M. Contucci, Lea Calò, Pasqualina M. Picciotti, Armando Manni, Anders Bennick, Alberto Vitali, Chiara Fanali, Rosanna Inzitari, and Massimo Castagnola
Mol Cell Proteomics 2008 7: 911-926. First Published on January 9, 2008; doi:10.1074/mcp.M700501-MCP200 [Abstract] [Full Text] [PDF]  

Relative Protein Quantification by Isobaric SILAC with Immonium Ion Splitting (ISIS)

Mara Colzani, Frédéric Schütz, Alexandra Potts, Patrice Waridel, and Manfredo Quadroni
Mol Cell Proteomics 2008 7: 927-937. First Published on December 28, 2007; doi:10.1074/mcp.M700440-MCP200 [Abstract] [Full Text] [PDF] Supplementl Data  

Characterization of Anaerobic Catabolism of p-Coumarate in Rhodopseudomonas palustris by Integrating Transcriptomics and Quantitative Proteomics

Chongle Pan, Yasuhiro Oda, Patricia K. Lankford, Bing Zhang, Nagiza F. Samatova, Dale A. Pelletier, Caroline S. Harwood, and Robert L. Hettich
Mol Cell Proteomics 2008 7: 938-948. First Published on December 20, 2007; doi:10.1074/mcp.M700147-MCP200 [Abstract] [Full Text] [PDF] Supplemental Data  

Proteomics Characterization of the Cytotoxicity Mechanism of Ganoderic Acid D and Computer-automated Estimation of the Possible Drug Target Network

Qing-Xi Yue, Zhi-Wei Cao, Shu-Hong Guan, Xiao-Hui Liu, Lin Tao, Wan-Ying Wu, Yi-Xue Li, Peng-Yuan Yang, Xuan Liu, and De-An Guo
Mol Cell Proteomics 2008 7: 949-961. First Published on December 31, 2007; doi:10.1074/mcp.M700259-MCP200 [Abstract] [Full Text] [PDF] Supplementl Data  

Comparison of Mascot and X!Tandem Performance for Low and High Accuracy Mass Spectrometry and the Development of an Adjusted Mascot Threshold

Markus Brosch, Sajani Swamy, Tim Hubbard, and Jyoti Choudhary
Mol Cell Proteomics 2008 7: 962-970. First Published on January 23, 2008; doi:10.1074/mcp.M700293-MCP200 [Abstract] [Full Text] [PDF] Supplemental Data  

Hydrophilic Interaction Chromatography Reduces the Complexity of the Phosphoproteome and Improves Global Phosphopeptide Isolation and Detection

Dean E. McNulty and Roland S. Annan
Mol Cell Proteomics 2008 7: 971-980. First Published on January 22, 2008; doi:10.1074/mcp.M700543-MCP200 [Abstract] [Full Text] [PDF] Supplemental Data  

Analysis of the Zebrafish Proteome during Embryonic Development

Margaret B. Lucitt, Thomas S. Price, Angel Pizarro, Weichen Wu, Anastasia K. Yocum, Christoph Seiler, Michael A. Pack, Ian A. Blair, Garret A. FitzGerald, and Tilo Grosser
Mol Cell Proteomics 2008 7: 981-994. First Published on January 22, 2008; doi:10.1074/mcp.M700382-MCP200 [Abstract] [Full Text] [PDF] Supplemental Data  

Characterization of Domain Interfaces in Monomeric and Dimeric ATP Synthase

Ilka Wittig, Jean Velours, Rosemary Stuart, and Hermann Schägger
Mol Cell Proteomics 2008 7: 995-1004. First Published on February 2, 2008; doi:10.1074/mcp.M700465-MCP200 [Abstract] [Full Text] [PDF]  

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Jan van Oostrum
Mol Cell Proteomics 2008 7: 1005. [Full Text] [PDF]  

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Mol Cell Proteomics 2008 7: 1006. [Full Text] [PDF]  

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