Table of Contents

Research

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  N-terminal Protein Processing: A Comparative Proteogenomic Analysis

  Stefano Bonissone, Nitin Gupta, Margaret Romine, Ralph A. Bradshaw and Pavel A. Pevzner

  Molecular & Cellular Proteomics January 1, 2013, First published on September 23, 2012, 12 (1) 14-28; https://doi.org/10.1074/mcp.M112.019075
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  Activity-dependent Protein Dynamics Define Interconnected Cores of Co-regulated Postsynaptic Proteins

  Jonathan C. Trinidad, Agnes Thalhammer, Alma L. Burlingame and Ralf Schoepfer

  Molecular & Cellular Proteomics January 1, 2013, First published on October 3, 2012, 12 (1) 29-41; https://doi.org/10.1074/mcp.M112.019976
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  Protein N-terminal Acetyltransferases Act as N-terminal Propionyltransferases In Vitro and In Vivo

  Håvard Foyn, Petra Van Damme, Svein I. Støve, Nina Glomnes, Rune Evjenth, Kris Gevaert and Thomas Arnesen

  Molecular & Cellular Proteomics January 1, 2013, First published on October 4, 2012, 12 (1) 42-54; https://doi.org/10.1074/mcp.M112.019299
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  Longitudinal Analysis of Maternal Plasma Apolipoproteins in Pregnancy: A Targeted Proteomics Approach

  Shannon K. Flood-Nichols, Deborah Tinnemore, Mark A. Wingerd, Ali I. Abu-Alya, Peter G. Napolitano, Jonathan D. Stallings and Danielle L. Ippolito

  Molecular & Cellular Proteomics January 1, 2013, First published on October 10, 2012, 12 (1) 55-64; https://doi.org/10.1074/mcp.M112.018192
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  The Proteome of Copper, Iron, Zinc, and Manganese Micronutrient Deficiency in Chlamydomonas reinhardtii

  Scott I. Hsieh, Madeli Castruita, Davin Malasarn, Eugen Urzica, Jonathan Erde, M. Dudley Page, Hiroaki Yamasaki, David Casero, Matteo Pellegrini, Sabeeha S. Merchant and Joseph A. Loo

  Molecular & Cellular Proteomics January 1, 2013, First published on October 13, 2012, 12 (1) 65-86; https://doi.org/10.1074/mcp.M112.021840
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  RACK1/Asc1p, a Ribosomal Node in Cellular Signaling

  Nicole Rachfall, Kerstin Schmitt, Susanne Bandau, Nadine Smolinski, Armin Ehrenreich, Oliver Valerius and Gerhard H. Braus

  Molecular & Cellular Proteomics January 1, 2013, First published on October 15, 2012, 12 (1) 87-105; https://doi.org/10.1074/mcp.M112.017277
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  Putting the Pieces Together: High-performance LC-MS/MS Provides Network-, Pathway-, and Protein-level Perspectives in Populus

  Paul Abraham, Richard J. Giannone, Rachel M. Adams, Udaya Kalluri, Gerald A. Tuskan and Robert L. Hettich

  Molecular & Cellular Proteomics January 1, 2013, First published on October 16, 2012, 12 (1) 106-119; https://doi.org/10.1074/mcp.M112.022996
• Open Access

  A Bioinformatics Approach for Integrated Transcriptomic and Proteomic Comparative Analyses of Model and Non-sequenced Anopheline Vectors of Human Malaria Parasites

  Ceereena Ubaida Mohien, David R. Colquhoun, Derrick K. Mathias, John G. Gibbons, Jennifer S. Armistead, Maria C. Rodriguez, Mario Henry Rodriguez, Nathan J. Edwards, Jürgen Hartler, Gerhard G. Thallinger, David R. Graham, Jesus Martinez-Barnetche, Antonis Rokas and Rhoel R. Dinglasan

  Molecular & Cellular Proteomics January 1, 2013, First published on October 17, 2012, 12 (1) 120-131; https://doi.org/10.1074/mcp.M112.019596
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  Quantitative Proteomic Analysis in Metastatic Renal Cell Carcinoma Reveals a Unique Set of Proteins with Potential Prognostic Significance

  Olena Masui, Nicole M. A. White, Leroi V. DeSouza, Olga Krakovska, Ajay Matta, Shereen Metias, Bishoy Khalil, Alexander D. Romaschin, R. John Honey, Robert Stewart, Kenneth Pace, Georg A. Bjarnason, K. W. Michael Siu and George M. Yousef

  Molecular & Cellular Proteomics January 1, 2013, First published on October 17, 2012, 12 (1) 132-144; https://doi.org/10.1074/mcp.M112.020701
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  Identification of Cargo Proteins Specific for the Nucleocytoplasmic Transport Carrier Transportin by Combination of an in Vitro Transport System and Stable Isotope Labeling by Amino Acids in Cell Culture (SILAC)-based Quantitative Proteomics

  Makoto Kimura, Shingo Kose, Nobuaki Okumura, Kenichiro Imai, Maiko Furuta, Noriyuki Sakiyama, Kentaro Tomii, Paul Horton, Toshifumi Takao and Naoko Imamoto

  Molecular & Cellular Proteomics January 1, 2013, First published on October 19, 2012, 12 (1) 145-157; https://doi.org/10.1074/mcp.M112.019414
• Open Access

  Quantification of the N-glycosylated Secretome by Super-SILAC During Breast Cancer Progression and in Human Blood Samples

  Paul J. Boersema, Tamar Geiger, Jacek R. Wiśniewski and Matthias Mann

  Molecular & Cellular Proteomics January 1, 2013, First published on October 22, 2012, 12 (1) 158-171; https://doi.org/10.1074/mcp.M112.023614
• Open Access

  Comparative Proteomics of Two Life Cycle Stages of Stable Isotope-labeled Trypanosoma brucei Reveals Novel Components of the Parasite's Host Adaptation Machinery

  Falk Butter, Ferdinand Bucerius, Margaux Michel, Zdenka Cicova, Matthias Mann and Christian J. Janzen

  Molecular & Cellular Proteomics January 1, 2013, First published on October 22, 2012, 12 (1) 172-179; https://doi.org/10.1074/mcp.M112.019224
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  Quantitative Proteomics with siRNA Screening Identifies Novel Mechanisms of Trastuzumab Resistance in HER2 Amplified Breast Cancers

  Alaina P. Boyer, Timothy S. Collier, Ilan Vidavsky and Ron Bose

  Molecular & Cellular Proteomics January 1, 2013, First published on October 25, 2012, 12 (1) 180-193; https://doi.org/10.1074/mcp.M112.020115
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  Comparative Genomic and Proteomic Analysis of Cytoskeletal Changes in Dexamethasone-Treated Trabecular Meshwork Cells

  Ross Clark, Amanda Nosie, Teresa Walker, Jennifer A. Faralli, Mark S. Filla, Gregory Barrett-Wilt and Donna M. Peters

  Molecular & Cellular Proteomics January 1, 2013, First published on October 28, 2012, 12 (1) 194-206; https://doi.org/10.1074/mcp.M112.019745
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  Identification and Validation of Urinary Metabolite Biomarkers for Major Depressive Disorder

  Peng Zheng, Ying Wang, Liang Chen, Deyu Yang, Huaqing Meng, Dezhi Zhou, Jiaju Zhong, Yang Lei, N. D. Melgiri and Peng Xie

  Molecular & Cellular Proteomics January 1, 2013, First published on October 30, 2012, 12 (1) 207-214; https://doi.org/10.1074/mcp.M112.021816
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  A Combined Laser Microdissection and Mass Spectrometry Approach Reveals New Disease Relevant Proteins Accumulating in Aggregates of Filaminopathy Patients

  Rudolf A. Kley, Alexandra Maerkens, Yvonne Leber, Verena Theis, Anja Schreiner, Peter F. M. van der Ven, Julian Uszkoreit, Christian Stephan, Stefan Eulitz, Nicole Euler, Janbernd Kirschner, Klaus Müller, Helmut E. Meyer, Martin Tegenthoff, Dieter O. Fürst, Matthias Vorgerd, Thorsten Müller and Katrin Marcus

  Molecular & Cellular Proteomics January 1, 2013, First published on October 31, 2012, 12 (1) 215-227; https://doi.org/10.1074/mcp.M112.023176
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  Proteomic Analysis of Protease Resistant Proteins in the Diabetic Rat Kidney

  Sneha B. Bansode, Ashok D. Chougale, Rakesh S. Joshi, Ashok P. Giri, Subhash L. Bodhankar, Abhay M. Harsulkar and Mahesh J. Kulkarni

  Molecular & Cellular Proteomics January 1, 2013, First published on November 1, 2012, 12 (1) 228-236; https://doi.org/10.1074/mcp.M112.020651