Table II

Summary of quantitative data

Ratios of all three bacterial treatments to control and of DC3000 to hrpA and avrRpm1 to DC3000 from one representative experiment are shown (H, Pst DC3000 (hrpA); D, Pst DC3000; A, Pst DC3000 (avrRpm1); C, control). Classification of proteins required p ≤ 0.05 in all three experiments for the predominant abundance pattern except where noted. p values were calculated using a paired Student's t test. AGI, Arabidopsis Gene Index; y, yes; n, no.

AGI no.AnnotationSignalPH/CD/CA/CD/HA/D
No significant pattern of change
    At1g14890Invertase/methylesterase inhibitor family proteiny0.691.231.031.780.84
    At4g26690Putative glycerophosphodiesterase 2 (GPDL2)y1.320.870.630.660.73
    At5g06860Polygalacturonase-inhibiting protein 1 (PGIP1)y0.670.701.171.041.68
    At5g44130Putative fasciclin-like arabinogalactan protein (FLA13)y0.980.780.600.800.76
    At5g51480Multicopper oxidase type I family protein (SKS2)y1.190.891.130.741.27
    At5g64120Peroxidase 71 (ATP15a)y0.702.201.483.160.67
Suppressed by all bacteria
    At1g74010Putative strictosidine synthaseay0.630.730.651.160.89
    At2g01820Putative receptor-like protein kinasey0.570.370.330.650.91
    At2g02990Ribonuclease (RNS1)y0.380.390.500.711.41
    At2g17760Aspartyl protease family proteinay0.660.500.430.760.86
    At2g46880Purple acid phosphatase (PAP14)y0.530.630.671.171.06
    At3g18280Lipid transfer proteiny0.440.470.381.080.80
    At4g34480Putative glucan endo-1,3-β-glucosidase 7y0.240.320.391.331.22
    At5g06720Peroxidase 53 (ATPA2)y0.390.370.300.930.82
    At5g67360Subtilisin-like protease (ARA12)y0.300.300.270.970.92
Induced by MAMPs/suppressed by TTEs
    At2g43570Putative class IV chitinasey5.781.631.350.280.83
    At4g25810Putative xyloglucan endotransglucosylase/hydrolase (XTH23)y2.070.570.700.271.22
Induced by MAMPs/suppressed by TTEs/restored by gene-for-gene resistance
    At1g68560α-Xylosidase (ATXYL1)ay1.350.701.430.522.04
Suppressed by TTEs
    At3g54420Class IV chitinase (AtEP3)y1.190.550.540.460.99
    At4g34180Putative cyclasey1.280.660.560.520.84
Induced by TTEs
    At1g78380Glutathione transferase (GSTU19)n0.515.342.3310.570.44
    At3g52880Peroxisomal monodehydroascorbate reductase 1 (MDAR 1)an0.902.772.993.071.08
    At3g55440Triose-phosphate isomerasean0.792.893.853.651.33
    At4g09320Nucleoside-diphosphate kinase I (NDPK1)an0.632.823.934.511.39
    At4g25100Superoxide dismutase (FSD1)n0.632.322.473.681.07
    At5g19440Cinnamyl-alcohol dehydrogenase-like proteinn0.842.503.592.971.44
Suppressed by MAMPs/induced by TTEs/suppressed by gene-for-gene resistance
    At1g13440/At3g04120Glyceraldehyde-3-phosphate dehydrogenase C (GAPDH)n0.212.110.3910.260.18
    At1g23190Putative phosphoglucomutasean0.412.251.495.480.66
    At1g56070Putative elongation factor EF-2an0.551.440.392.600.27
    At1g63770Putative aminopeptidasean0.721.690.602.360.36
    At2g36530Enolasean0.363.380.939.510.28
    At5g17920Cobalamin-independent methionine synthase (MS1)n0.391.980.795.030.40
Induced by gene-for-gene resistance
    At1g35720Annexin (ANNAT1)an0.981.393.711.432.66
    At1g45145Thioredoxin (TRX5)n2.142.3117.751.087.70
    At1g76160Multicopper oxidase type I family protein (SKS5)ay0.430.612.101.443.42
    At1g78830Curculin-like lectin family proteiny1.721.302.750.762.12
    At1g79550Putative phosphoglycerate kinasen1.011.225.211.214.29
    At2g05920Putative subtilisin-like serine proteaseay1.201.092.080.901.91
    At2g16060Non-symbiotic hemoglobin 1 (AHB1)n0.711.905.412.692.85
    At2g16430.2Purple acid phosphatase (PAP10)y1.501.055.620.705.35
    At2g21130/At4g38740Peptidyl-prolyl cis-trans isomerasean1.241.379.131.106.69
    At2g32520Putative carboxymethylenebutenolidasen1.232.979.252.423.11
    At3g28940AIG2 protein-liken1.592.5318.531.607.32
    At5g59880Actin-depolymerizing factor 3 (ADF3)n0.841.807.182.153.99
Ubiquitinn0.822.175.002.662.31
  • a p ≤ 0.05 in two of three experiments.