Table I Number of identified proteins in secretome of each cancer cell line
Cancer type and cell lineNo. of identified proteinsaFDRb
%
NPC
    NPC-TW028410.99
    NPC-TW041,0670.47
    NPC-BM11,1290.72
CRC
    Colo2051,3220.39
    SW4808570.41
    SW6201,4400.61
HCC
    SK-Hep-19540.42
    HepG27750.62
    Hep-3B1,8190.31
Oral cancer
    OEC-M11,3430.59
    SCC-41,5060.71
Bladder cancer
    U11,0710.51
    U42,1420.50
Breast cancer
    MCF-71,3180.81
    MDA-MB-435S1,7800.34
Cervix cancer
    C-33A1,2840.92
    HeLa1,2230.82
Lung adenocarcinoma
    CL1–01,0960.70
    CL1–51,8300.26
Pancreatic ductal adenocarcinoma
    PANC-11,0350.37
    MIA-PaCa-21,6090.31
Epidermoid carcinoma
    A-4311,4580.51
T cell lymphoma
    Jurkat2,2810.41
All 23 cell lines4,584
  • a The number of identified proteins that contained at least two peptide hits.

  • b The FDR was calculated from the spectra assigned to random database over normal database.