Table II Top proteins differentially expressed through the 3% 24 hour stretch and time parameters found within IPA networks. Gene symbol and accession are listed with the protein name. The number of peptides found, and confidence levels for those peptides are listed. The percent coverage (95%) (%Cov95) is calculated by dividing the number of amino acids of peptides identified with 95% confidence by the total number of amino acids in the protein
Gene SymbolAccessionProtein NameNumber of PeptidesPeptide Conf.Cellular Location%Cov%Cov (95)Fold Ratio
Up-regulated3% for 24 HoursPSME1Q06323Proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)271Cytoplasm67.802.189
COR1CQ9ULV4Coronin-1198Cytoplasm30.45.11.76
UGDHO60701UDP-glucose 6-dehydrogenase194Nucleus48.610.51.71
SPCS2Q15005Signal peptidase complex subunit 2199Cytoplasm23.58.41.70
DNJB4Q9UDY4DnaJ homolog subfamily B member 4199Nucleus47.83.561.69
HDGR3Q9Y3E1Hepatoma-derived growth factor-related protein 3181Nucleus17.701.61
FRILP02792Ferritin light chain299Cytoplasm70.3201.59
SH3L1O75368SH3 domain-binding glutamic acid-rich-like protein185Unknown47.401.54
FBLN2P98095Fibulin-2299Extracellular matrix22.65.41.51
Down-regulatedH2B1HQ93079Histone H2B type 1-H299Nucleus61.115.9−2.91
RABP1P29762Cellular retinoic acid-binding protein 1299Cytoplasm30.720.4−2.01
ROA0Q13151Heterogeneous nuclear ribonucleoprotein A0199Nucleus48.59.2−1.97
CA123Q9NWV4UPF0587 protein C1orf123198Unknown18.12510−1.93
RBM27Q9P2N5RNA-binding protein 27192Unknown26.60−1.72
CO1A1P02452Collagen alpha-1(I) chain399Extracellular matrix81.16−1.69
2ABAP63151Serine/threonine-protein phosphatase 2A199Cytoplasm21.92.0−1.68
SMAPO00193Small acidic protein199Unknown19.78.7−1.68
TBB5P07437Tubulin beta chain699Cytoplasm87.450.5−1.68
PRS6BP4368626S protease regulatory subunit 6B199Nucleus30.93.3−1.65