Table I Proteins assigned to P. aeruginosa that have been identified secreted in specific patterns either during the time courses of mono- or mixed-species biofilms or compared between mono- and mixed-species biofilms

Numbers represent the average amount of peptides of two technical replicates that have been found in P. aeruginosa biofilms (upper rows) or mixed biofilms (lower rows). Proteins with predicted secretion domains are marked with an asterisk.

AccessionNameFunction1.5 h3 h4.5 h6 h24 h48 h
PA0049*Hypothetical protein1.53.0
PA0146*Conserved hypothetical protein2.06.0
PA0300*spuDPolyamine transport protein0.51.03.5
1.5
PA0423*pasPPasP protease9.06.012.54.511.512.0
4.59.05.04.512.019.0
PA0468*Hypothetical protein0.52.5
PA0572*Hypothetical protein3.01.05.03.5
1.04.52.54.529.516.5
PA0620*Probable bacteriophage protein0.52.0
PA0622Probable bacteriophage protein2.55.0
1.01.00.5
PA0623Probable bacteriophage protein1.56.56.0
1.01.50.52.53.0
PA0807ampDh3AmpDh3 N-acetyl-anhydro-muramyl-l-alanine amidase3.52.56.53.59.013.5
1.03.02.01.53.52.0
PA0852*cbpDChitin-binding protein CbpD precursor10.01.01.50.54.56.5
1.03.51.52.06.56.0
PA0888*aotJArginine/ornithine-binding protein AotJ3.00.51.01.04.0
2.01.51.52.0
PA0962Probable DNA-binding stress protein5.57.5
PA0973*oprLPeptidoglycan-associated lipoprotein OprL precursor0.51.52.04.5
1.00.51.52.0
PA1074*braCBranched-chain amino acid transport protein BraC1.51.0
2.03.0
PA1092fliCFlagellin type B5.52.50.51.5
2.01.51.0
PA1094fliDFlagellar capping protein FliD1.01.01.513.020.0
0.51.01.05.05.0
PA1148*toxAExotoxin A precursor1.0
3.017.021.5
PA1249aprAAlkaline metalloproteinase precursor6.511.047.548.064.067.0
3.57.514.517.535.039.0
PA1342*Probable binding protein component of ABC transporter4.03.51.55.012.0
2.52.53.0
PA1777*oprFMajor porin and structural outer membrane porin OprF precursor1.01.01.51.54.56.5
1.50.51.00.51.0
PA1871*lasALasA protease precursor2.00.53.05.0
2.01.0
PA1982*exaAQuinoprotein ethanol dehydrogenase1.08.5
14.5
PA2451Hypothetical protein0.51.0
8.54.55.524.520.0
PA2452*Hypothetical protein0.51.5
8.59.015.033.025.5
PA2453*Hypothetical protein0.50.53.03.0
1.00.51.00.50.51.5
PA2462*Hypothetical protein1.0
2.0
PA2623icdIsocitrate dehydrogenase5.02.0
0.51.0
PA2787*cpg2Carboxypeptidase G2 precursor0.50.5
2.5
PA2862*lipALactonizing lipase precursor1.03.012.0
PA2939*Probable aminopeptidase6.04.019.018.085.592.5
6.511.528.533.5
PA3029moaB2Molybdopterin biosynthetic protein B20.5
2.5
PA3313Hypothetical protein1.53.0
5.0
PA3529Probable peroxidase0.50.5
2.5
PA3724*lasBElastase LasB2.06.05.06.011.5
0.54.01.06.56.5
PA3922*Conserved hypothetical protein7.012.0
2.0
PA4031ppaInorganic pyrophosphatase0.54.53.0
3.0
PA4175*pivProtease IV4.59.022.012.517.025.0
4.06.013.016.023.024.0
PA4236katACatalase10.02.013.06.04.51.0
0.52.5
PA4265tufAElongation factor Tu4.0
2.0
PA4366sodBSuperoxide dismutase3.01.53.51.03.5
2.01.0
PA4385groELGroEL-protein chaperonine0.52.53.0
1.52.0
PA4497*Probable binding protein component of ABC transporter2.08.0
PA4554*pilY1Type 4 fimbrial biogenesis protein PilY16.017.0
9.513.0
PA4625*cdrACyclic diguanylate-regulated TPS partner A, CdrA3.53.021.026.0
2.04.07.513.012.5
PA4648*Hypothetical protein2.02.0
0.50.5
PA4858*Conserved hypothetical protein0.51.08.016.0
PA4913*Probable binding protein component of ABC transporter13.518.0
PA4922*azuAzurin precursor5.03.57.54.03.09.0
1.53.02.51.01.50.5
PA5033*Hypothetical protein0.50.5
4.53.0
PA5153*Amino acid ABC transporter periplasmic binding protein1.01.01.00.52.54.0
1.01.03.0
PA5171arcAArginine deiminase2.0
2.0
PA5172arcBOrnithine carbamoyltransferase, catabolic3.54.09.5
0.51.53.53.0
PA5303Conserved hypothetical protein1.52.03.51.02.02.5
1.00.50.50.5
PA5339Conserved hypothetical protein1.00.51.51.01.0
0.50.50.52.0
PA5378*Hypothetical protein3.0
PA5505*Probable TonB-dependent receptor2.0
3.0