Table VI The zinc-deficient proteome recapitulates in part the copper-deficient proteome
Protein IDaGene nameDescription+Cu (zmol/cell)−Cu (zmol/cell)Fold changeb+Zn (zmol/cell)−Zn (zmol/cell)Fold changeb
Cre02.g085450CPX1Coprogen III oxidase88 ± 54899 ± 16410n.d.35 ± 18n/a
Cre17.g701700FAB2Plastid acyl-ACP desaturase127 ± 17631 ± 62562 ± 1987 ± 311.4
Cre12.g490500CGL78Ycf54, aerobic cyclase subunit56 ± 4225 ± 434n.d.31 ± 0.7n/a
Cre12.g546550FEA1Fe-assimilating protein 1520 ± 64239 ± 1720.5634 ± 144331 ± 1670.5
536235DJ-1/PfpI family19 ± 1150 ± 6321 ± 20n.d.n/a
Cre10.g424750PPD1Pyruvate phosphate dikinase39 ± 17168 ± 30437 ± 28134 ± 233.6
Cre03.g182551PCY1Plastocyanin1350 ± 261n.d.n/a1458 ± 508725 ± 860.5
Cre20.g758200ADH1Alcohol/acetaldehyde dehydrogenase114 ± 13217 ± 38227 ± 16113 ± 294.1
Cre01.g044800PFL1Pyruvate-formate lyase280 ± 95475 ± 752172 ± 24239 ± 321.4
Cre14.g626200PHX7Prolyl 4-hydroxylasen.d.2 ± 1n/an.d.11 ± 14n/a
Cre14.g626200PHX18Prolyl 4-hydroxylasen.d.23 ± 13n/an.d.30 ± 5n/a
  • n.d., not detected; n/a, not applicable.

  • a Protein IDs are based on Augustus 10.2 nomenclature, except in cases in which proteins were only identified with FM3.1 database searches.

  • b The ratio of protein abundance under deficiency versus protein abundance under replete conditions.