Table I List of all glycoproteins and the corresponding glycosylated peptides used in the SILAC PRM- MS analysis of N-linked glycosylation occupancy
UniProt IDProteinGlycosylation SiteModified Peptide SequenceProtein Description
P00729CPYN124ILGIDPN[HexNAc]VTQYTGYLDVEDEDKCarboxypeptidase Y
P00729CPYN479VRN[HexNAc]WTASITDEVAGEVKCarboxypeptidase Y
P12684HMG2N150IPTELVSEN[HexNAc]GTK3-hydroxy-3-methylglutaryl-coenzyme A reductase 2
P17967PDIN425LAPTYQELADTYAN[HexNAc]ATSDVLIAKProtein disulfide-isomerase
P17967PDIN117NSDVN[HexNAc]NSIDYEGPRProtein disulfide-isomerase
P17967PDIN82N[+203.1]ITLAQIDC[+57]TENQDLC[+57]M[+16]EHNIPGFPSLKProtein disulfide-isomerase
P17967PDIN174IDADFN[HexNAc]ATFYSMANKProtein disulfide-isomerase
P17967PDIN155QSQPAVAVVADLPAYLAN[HexNAc]ETFVTPVIVQSGKProtein disulfide-isomerase
P22146GAS1N40FFYSNN[HexNAc]GSQFYIR1,3-beta-glucanosyltransferase
P23797GPI12N110VRELN[HexNAc]ESAALLLHNERGlcANc-phosphatidylinositol de-N-acetylase
P27810KTR1N120N[HexNAc]VTSALVSGTTKAlpha-1,2 mannosyltransferase
P27825CNE1N416N[HexNAc]VTEAQIIGNKCalnexin homolog
P31382PMT2N403GLPSWSEN[HexNAc]ETDIEYLKPGTSYRDol-P-Man-protein mannosyltransferase 2
P32353ERG3N40LLGLNSGFSN[HexNAc]STILQETLNSKC-5 sterol desaturase
P32623CRH2N310N[HexNAc]GTSAYVYTSSSEFLAKProbable glycosidase CRH2
P32623CRH2N233/N237N[HexNAc]ETYN[HexNAc]ATTQKProbable glycosidase CRH2
P33302PDR5N734GPAYAN[HexNAc]ISSTESVCTVVGAVPGQDYVLGDDFIRPleiotropic ABC efflux transporter of multiple drugs
P33754SEC66N12FSNN[HexNAc]GTFFETEEPIVETKTranslocation protein
P33767WBP1N332LTLSPSGN[HexNAc]DSETQYYTTGEFILPDROligosaccharyltransferase subunit WBP1
P33767WBP1N60LEYLDIN[HexNAc]STSTTVDLYDKOligosaccharyltransferase subunit WBP1
P36016LHS1N458LSN[HexNAc]ESELYDVFTRHeat shock protein 70 homolog
P36051MCD4N90SLVMNN[HexNAc]ATYGISHTRGPI ethanolamine phosphate transferase 1
P36051MCD4N198HLDQLFHN[HexNAc]STLNSTLDYEIRGPI ethanolamine phosphate transferase 1
P36091DCW1N203YTGN[HexNAc]QTYVDWAEKMannan endo-1,6-alpha-mannosidase
P37302APE3N96LAN[HexNAc]YSTPDYGHPTRAminopeptidase Y
P37302APE3N150IISFN[HexNAc]LSDAETGKAminopeptidase Y
P37302APE3N162SFAN[HexNAc]TTAFALSPPVDGFVGKAminopeptidase Y
P37302APE3N85IKVDDLN[HexNAc]ATAWDLYRAminopeptidase Y
P38244PFF1N121SILFQQQDPFN[HexNAc]ESSRProbable zinc metalloprotease YBR074W
P38248ECM33N304VQTVGGAIEVTGN[HexNAc]FSTLDLSSLKCell wall protein ECM33
P38843CHS7N31THLILSN[HexNAc]STIIHDFDPLNLNVGVLPRChitin synthase export chaperone
P38875GPI16N184SYASDIGAPLFN[HexNAc]STEKGPI transamidase component
P38993FET3N244N[HexNAc]VTDMLYITVAQRIron transport multicopper oxidase FET3
P38993FET3N359NGVNYAFFNN[HexNAc]ITYTAPKIron transport multicopper oxidase FET3
P39007STT3N539TTLVDNNTWN[HexNAc]NTHIAIVGKOligosaccharyltransferase subunit STT3
P39105PLB1N215DAGFN[HexNAc]ISLADVWGRLysophospholipase 1
P39105PLB1N489N[HexNAc]LTDLEYIPPLIVYIPNSRLysophospholipase 1
P40345PDATN439SSSEDALNN[HexNAc]NTDTYGNFIRPhospholipid:diacylglycerol acyltransferase
P40533TED1N266DNYWIEYETN[HexNAc]TTHPWRProtein TED1
P40557EPS1N299FPN[HexNAc]ITEGELEKER-retained PMA1-suppressing protein 1
P40557EPS1N264VALVLPN[HexNAc]KER-retained PMA1-suppressing protein 1
P41543OST1N217FSSN[HexNAc]ETLAIVYSHNAPLNQVVNLROligosaccharyltransferase subunit OST1
P43561FET5N364YAFFNN[HexNAc]ITYVTPKIron transport multicopper oxidase FET5
P43561FET5N24LN[HexNAc]YTASWVTANPDGLHEKIron transport multicopper oxidase FET5
P43611OSW7N297NLDDLN[HexNAc]TTVNEQLVFLDSKUncharacterized protein YFR039C
P46982MNN5N136LN[HexNAc]FSIPQRAlpha-1,2-mannosyltransferase MNN5
P46992YJR1N219N[HexNAc]SSSIGYYDLPAIWLLNDHIARCell wall protein YJL171C
P52911EXG2N50FASYYAN[HexNAc]DTITVKGlucan 1,3-beta-glucosidase 2
P52911EXG2N157NLYIDN[HexNAc]ITFNDPYVSDGLQLKGlucan 1,3-beta-glucosidase 2
P53379MKC7N286STAYSLFAN[HexNAc]DSDSKAspartic proteinase MKC7
P54003SUR7N47FYWVQGN[HexNAc]TTGIPNAGDETRProtein SUR7
Q03103ERO1N458YTIENIN[HexNAc]STKEndoplasmic oxidoreductin-1
Q03281HEH2N520SN[HexNAc]NTNYIYRInner nuclear membrane protein
Q03674PLB2N193SIVNPGGSN[HexNAc]LTYTIERLysophospholipase 2
Q03674PLB2N217SDAGFN[HexNAc]ISLSDLWARLysophospholipase 2
Q03691ROT1N139YN[HexNAc]QTETFKProtein ROT1
Q06689YL413N429ILNSAVN[HexNAc]MTTITPEQLKCell membrane protein YLR413W
Q06689YL413N49IN[HexNAc]VTKCell membrane protein YLR413W
Q07830GPI13N411N[HexNAc]ISNTPPTSDPEKGPI ethanolamine phosphate transferase 3
Q12465RAX2N88EIGPETSSHGLVYYSN[HexNAc]NTYIQLEDASDDTRBud site selection protein
Q12465RAX2N677N[HexNAc]QTIQGDVHGITKBud site selection protein
Q12465RAX2N640N[HexNAc]SSLYADIYDNKBud site selection protein