Table II Up-regulated proteins in BMP4-treated cells (signal-to-noise ratio ≥ 10)
Spot no.Protein nameNCBI accession no.Theoretical molecular massTheoretical pISequence coverageMatched/searched
Da%
1Crystallin, αBgi|675353020,056.46.766513/127
2Protein-lysine 6-oxidase precursorgi|12663846,671.58.73175/148
3Tumor protein, translationally controlled 1gi|667843719,449.64.76539/98
4SH3-binding domain glutamic acid-rich protein-likegi|991054812,803.24.99505/169
5SH3 domain protein 3gi|2226744023,767.95.465011/100
6Proteasome subunit β type 2gi|991083222,891.76.524711/90
7Peroxiredoxin 1gi|675497622,162.38.265616/102
8Nucleoside-diphosphate kinase 2gi|667907817,351.96.97598/113
9Cofilin 1, non-musclegi|668092418,547.78.22415/61
10Peroxiredoxin 6gi|667154924,8115.986512/26
11Proteasome (prosome, macropain) subunit, α type 5gi|710638726,394.24.74367/63
12Glutathione S-transferase, Pi 1gi|1009260823,594.17.68519/90
13Glyceraldehyde-3-phosphate dehydrogenasegi|6220148735,815.28.154815/112
14Predicted: similar to histone H2B F (H2B 291A)gi|9439473417,927.510.095210/121
15Similar to phosphoglycerate mutase 1gi|9436918528,918.96.195712/66
16FK506-binding protein 1agi|667980311,915.17.88414/107
17Similar to phosphoglycerate kinase 1gi|5170809244,5228.025420/74
18Profilin 1gi|675504014,947.58.46739/63
19Pyruvate kinase 3gi|3198156257,8087.184222/124
20Cystatin Bgi|668107111,038.56.82597/68
21Nucleoside-diphosphate kinase 1gi|3770023217,196.86.848415/113
22Histidine triad nucleotide-binding protein 1gi|3346885713,768.16.36617/90
23Calponin 3, acidicgi|2131256436,405.85.464914/94
24Putative β-actin (amino acids 27–375)gi|4986839,160.65.782616/173
25RAN-binding protein 1gi|4639782823,581.75.15376/68
26S100 calcium-binding protein A4gi|3385962411,713.75.23538/89
27Predicted: similar to polyubiquitin isoform 3gi|9437539117,399.47.93657/67