Table I SRM parameters of SRM assays of RelA and other proteins. Masses listed are for the natural forms of the peptides. Abbreviations: Coll., collision; Q, quadropole
Protein nameGene nameUniProt accession no.Peptide sequencePeptide molecular mass (Da)Q1Q3Coll. energy (V)Fragment ion
Transcription factor p65RelAQ04206TPPYADPSLQAPVR1510.792756.396867.50430y8
756.396982.53124y9
756.3961053.56826y10
756.3961313.68426y12
NF-kappa-B inhibitor alphaIκBαP25963LEPQEVPR966.528484.264500.28220y4
484.264628.34120y5
484.264725.39420y6
484.264854.43620y7
484.264967.52020y8
Actin, cytoplasmic 1ACTBP60709AVFPSIVGR944.558473.279531.32419y5
473.279628.37719y6
473.279775.44619y7
473.279874.51419y8