Table III Fusion junction peptides identified in CPTAC ovarian samples
Fusion geneChr.Fusion junctionPeptide sequence# of spectraSource DBa
ANXA2P2:ANXA29–1533625242–60639739DTN:AERDALNIETAIK1C
**ANXA2P2:ANXA29–1533625242–60639739SLYYYIQQDTN:A1C
*SPAG9:MBTD117–1749156945–49258055DQ:MTTLQLK1C, T
EMID1:CBY122–2229630338–39069164QGSAGQR:AGGRR18C, T
PPFIBP1:SMCO212–1227677298–27654856EVCELCTL:MALTPTNLNNK15C, T
*CCDC6:ANK310–1061665880–61802517ASVTI:QGEGFK3C, T
*CCDC6:ANK310–1061665880–61802514ASVTI:GEGFK1C, T
MAPK9:UBL75–15179718848–74749012IPAI:GAGALGSAGSMCV1C, T
OBSL1:STK11IP2–2220430127–220467497PPPHVP:PSGTEHP2C
ACTN4:CAPN1219–1939217667–39220940VGWEQLLTTIA:LG23C
ACTN4:CAPN1219–1939219963–39220936ATCEAPD:YVFIMRAGETAEI1C
FBXO34:LGALS314–1455738255–55604088RAGAAPGQAAAGAGAQ:WKPKP5C, T
SLC25A32:SMYD38–1104419862–246518396FILGTLLFL:MEP1T
H19:COL1A111–172018215–48264480GSSGTAFSGLCRSLEG:PLALLVLLA1C
C2CD3:SYTL111–173849765–27671788LLS:SSVCPAGAQPQLMPQR1C, T
SH3BP5:METTL63–315372011–15425694MISTDGRLNLR:SQT2C, T
  • *This fusion protein is also detected in other tissues according to the Mitelman Database.

  • **This fusion protein does not span junction properly, but another junction peptide (DTN:AERDALNIETAIK) supports this same fusion junction.

  • aC: ChimerDB 3.0; T: TumorFusions.