Table II

Differentially expressed proteins identified by PMF

Spot no.NCBI accession no.Protein nameOrganismTheoreticalObservedScoreMaCb
MrpIMrpI
1 AAQ24377 Glycine dehydrogenase P protein O. sativa 111.46.5199.76.201302433
2 AAQ24377 Glycine dehydrogenase P protein O. sativa 111.46.5196.86.361562833
3 AAQ24377 Glycine dehydrogenase P protein O. sativa 111.46.5196.86.411482833
4 XP_480473 Putative aconitate hydratase O. sativa 98.05.6795.05.992003040
5 AAQ24377 Glycine dehydrogenase P protein O. sativa 111.46.5183.05.061973346
6 AAL58200 Putative reductase O. sativa 81.15.8681.95.81931830
7 AAP54159 Mitochondrial chaperonin 60 O. sativa 60.85.7161.95.391732847
8 NP_918873 Ferredoxin-nitrite reductase O. sativa 66.16.8369.56.07861629
9 AAS46127 Rubisco large chain O. sativa 53.76.3353.86.471312436
10 XP_481212 Unknown protein O. sativa 51.66.4849.36.27961637
14 AAP79448 epi-Arisotolchene synthase 110 Nicotiana tabacum 62.65.6844.95.36781431
16 XP_471943 OSJNBA0008A08.11 O. sativa 38.26.0340.56.281181837
17 NP_912465 Putative nascent polypeptide-associated complex α chain O. sativa 23.74.2835.54.311131266
18 P29545 Elongation factor 1-β′ O. sativa 23.64.8633.94.6554625
19 P29545 Elongation factor 1-β′ O. sativa 23.64.8634.04.7470936
20 NP_914976 Putative nascent polypeptide-associated complex α chain O. sativa 22.14.3930.24.43851044
22 NP_910055 Unknown protein O. sativa 27.96.3433.56.4382941
24 AAX95664 Unknown protein O. sativa 38.98.2229.96.40711342
25 NP_200442 PPR-containing protein Arabidopsis thaliana 59.27.2732.85.89691428
26 AAM12321 ATPase α subunit, 3′-partial O. sativa 29.35.2729.35.81991440
27 NP_911136 Probable photosystem II oxygen-evolving complex protein 2 precursor O. sativa 26.98.6626.36.131151249
31 P18567 Rubisco small chain C precursor O. sativa 19.69.0415.96.1263853
32 NP_913556 Unnamed protein O. sativa 84.06.3788.96.42701625
33 AAN08662 Hypothetical protein O. sativa 77.99.1576.35.20672024
34 XP_493737 Similar to wak1 gene O. sativa 81.15.680.55.63651725
35 XP_483661 Putative armadillo repeat-containing protein O. sativa 69.75.9470.85.36631321
36 AAQ24377 Glycine dehydrogenase P protein O. sativa 111.46.5178.75.89831924
37 AAQ24377 Glycine dehydrogenase P protein O. sativa 111.46.5175.56.121252731
39 AAF67342 β-Galactosidase Vigna radiata 82.48.6357.64.92721323
40 NP_910308 Putative chaperonin 60 β precursor O. sativa 64.05.662.95.241292235
41 NP_915977 Putative 2,3-bisphosphoglycerate-independent phosphoglycerate mutase O. sativa 56.05.4595.22831340
44 CAD40552 OSJNBA0072K14.5 O. sativa 48.38.6548.45.32881334
45 XP_483794 Putative malate dehydrogenase (NADP) O. sativa 47.06.9650.95.581121846
47 XP_463271 Putative oxalyl-CoA decarboxylase O. sativa 60.85.9544.75.40941728
48 P93438 S-Adenosylmethionine synthetase 2 O. sativa 42.95.6844.95.94761236
51 NP_039390 ATP synthase CF1 β chain O. sativa 54.05.4740.16.231762345
52 NP_914347 Putative glycerol-3-phosphate dehydrogenase (NAD+) O. sativa 36.46.1438.85.14741239
53 NP_039390 ATP synthase CF1 β chain O. sativa 54.05.4738.95.34881442
54 NP_917701 Putative protein phosphatase 2C-like protein O. sativa 33.56.0137.65.34631129
55 NP_039390 ATP synthase CF1 β chain O. sativa 54.05.4738.35.631161743
56 AAL06879 AT5G07010/MOJ9_18 A. thaliana 41.46.7337.55.73731141
57 NP_914407 Putative plastidic cysteine synthase 1 O. sativa 43.66.0538.75.89741135
58 CAB16835 ATPase-like protein A. thaliana 69.69.2338.96.43651325
59 AAS46127 Rubisco large chain O. sativa 53.76.3337.26.321252436
61 AAO22558 Sedoheptulose-1,7-bisphosphatase precursor O. sativa 42.25.8334.85.06841539
62 AAP55157 Myosin-like protein O. sativa 104.55.4835.35.30852525
64 A38889 Photosystem II oxygen-evolving complex protein 1 O. sativa 26.55.1332.05.50901043
66 P12089 Rubisco large chain precursor O. sativa 52.86.2236.36.12691431
67 NP_039391 Rubisco large chain O. sativa 52.86.2231.06.09831826
68 NP_039391 Rubisco large chain O. sativa 52.86.2231.66.23731531
69 P12089 Rubisco large chain precursor O. sativa 52.86.2230.66.54571522
75 T02958 Rubisco large chain precursor O. sativa 45.18.4321.45.19671134
77 Q08479 Adenylate kinase A O. sativa 26.48.4921.36.89571043
83 P09229 Cysteine proteinase inhibitor-I O. sativa 11.44.9814.44.0955560
84 AAS46127 Rubisco large chain O. sativa 52.86.2216.84.90731531
88 CAA98165 RAB2A Lotus corniculatus 23.16.9616.16.4869962
  • a Number of mass values matched.

  • b Sequence coverage.